BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F08SP1|AL426719
(740 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1170 1450 0.0
>3x_Contig1170
Length = 4668
Score = 1450 bits (731), Expect = 0.0
Identities = 739/741 (99%), Gaps = 1/741 (0%)
Strand = Plus / Minus
Query: 1 atctgtttctacactgtagatctagtagaagacgaakt-agcagtaccagaagtgacaga 59
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 3541 atctgtttctacactgtagatctagtagaagacgaagttagcagtaccagaagtgacaga 3482
Query: 60 aacggtacaaccgtcagagccactaccagtgtaactaccatcgatgtaagaacaagcacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 aacggtacaaccgtcagagccactaccagtgtaactaccatcgatgtaagaacaagcacc 3422
Query: 120 gttcacagaagcgccgtcagcagcctcaatcttaatggagtagtttggagcctcgttgtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 gttcacagaagcgccgtcagcagcctcaatcttaatggagtagtttggagcctcgttgtt 3362
Query: 180 gtttgggttaggaatgatggacaggtaagtgataccattgacgtaaccagcacccaagac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 gtttgggttaggaatgatggacaggtaagtgataccattgacgtaaccagcacccaagac 3302
Query: 240 aactggggcccagttaccgacaccagaaccgtcagtaccccagatacaaccgtcttcaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 aactggggcccagttaccgacaccagaaccgtcagtaccccagatacaaccgtcttcaac 3242
Query: 300 agaaacaccggcgttgttgacgtagtattgagaagaggtggatttaccttgccatttgta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 agaaacaccggcgttgttgacgtagtattgagaagaggtggatttaccttgccatttgta 3182
Query: 360 gtaagaatcttcgtcaacgacggagattggcttcttagagtttggttggaccaaagttgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 gtaagaatcttcgtcaacgacggagattggcttcttagagtttggttggaccaaagttgg 3122
Query: 420 aacaaccatattttcagaacccgggtagtcagttctacacaaggagatagcagagtcctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 aacaaccatattttcagaacccgggtagtcagttctacacaaggagatagcagagtcctt 3062
Query: 480 gttgttaacggcgtaagaggattgacgaccccattcacacaagtatttggaatcttggtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 gttgttaacggcgtaagaggattgacgaccccattcacacaagtatttggaatcttggtt 3002
Query: 540 cgtacggtataagtaaccgttcttacatagcaaaccaccgatggacttaccatcgcttgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 cgtacggtataagtaaccgttcttacatagcaaaccaccgatggacttaccatcgcttgg 2942
Query: 600 ttgttcgctaggccattgggtcttggacataccagcttgacaagcataagaacagtagta 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 ttgttcgctaggccattgggtcttggacataccagcttgacaagcataagaacagtagta 2882
Query: 660 accgtcttcacaagagctagaagtttcaccgtccatgtccatgatagtggaccagccgtc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 accgtcttcacaagagctagaagtttcaccgtccatgtccatgatagtggaccagccgtc 2822
Query: 720 caaaccgatccagtcaacggc 740
|||||||||||||||||||||
Sbjct: 2821 caaaccgatccagtcaacggc 2801
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3785
Number of Sequences: 1807
Number of extensions: 3785
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 740
length of database: 10,358,551
effective HSP length: 16
effective length of query: 724
effective length of database: 10,329,639
effective search space: 7478658636
effective search space used: 7478658636
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)